Fine module 144 - B lineage expression, includes genes involved in signal transduction


Model's activators:
SymbolAssignmentTitlemin expressionmax expressionmean weightmin weightmax weightNCBI human gene summary
ATF6C25 F137activating transcription factor 65.7910.720.0681510.0681510.068151
IRF5C25 F135interferon regulatory factor 56.0311.710.0345890.0345890.034589Summary: This gene encodes a member of the interferon regulatory factor (IRF) family, a group of transcription factors with diverse roles, including virus-mediated activation of interferon, and modulation of cell growth, differentiation, apoptosis, and immune system activity. Members of the IRF family are characterized by a conserved N-terminal DNA-binding domain containing tryptophan (W) repeats. Multiple transcript variants encoding different isoforms have been found for this gene, and a 30-nt indel polymorphism (SNP rs60344245) can result in loss of a 10-aa segment. [provided by RefSeq].
POU2AF1C33 F176POU domain, class 2, associating factor 15.1112.600.02965400.52961
TCFE3C24 F120transcription factor E35.7810.080.0226830.0226830.022683Summary: The microphthalmia transcription factor/transcription factor E (MITF-TFE) family of basic helix-loop-helix leucine zipper (bHLH-Zip) transcription factors includes four family members: MITF, TFE3, TFEB and TFEC. The TEF3 protein encoded by this gene activates transcription through binding to the muE3 motif of the immunoglobulin heavy-chain enhancer. The TFEC protein forms heterodimers with the TEF3 protein and inhibits TFE3-dependent transcription activation. The TEF3 protein interacts with transcription regulators such as E2F3, SMAD3, and LEF-1, and is involved in TGF-beta-induced transcription, playing important roles in cell growth, proliferation, and osteoclast and macrophage differentiation. The TFE3 protein also activates hepatic IRS-2 gene, and induces hexokinase II (HK2) and insulin-induced gene 1 (INSIG1); it participates in insulin signaling and could be a therapeutic target for diabetes. This gene is also involved in chromosomal translocations, resulting in different fusion gene products in papillary renal cell carcinomas and alveolar soft part sarcomas, such as PRCC-TFE3, RCC17-TFE3, PSF-TFE3, NonO (p54nrb)-TFE3 and ASPL-TFE3.
BACH1C24 F122BTB and CNC homology 16.7111.140.0203680.0203680.020368
PAX5C33 F176paired box gene 55.2212.450.02024100.23969
KDM5AC1 F10lysine (K)-specific demethylase 5A6.5210.500.01713100.028552
SPIBC33 F180Spi-B transcription factor (Spi-1/PU.1 related)4.7112.630.01527600.1809
TRPS1C45 F232trichorhinophalangeal syndrome I (human)5.2611.130.0108210.00251030.15833Summary: This gene encodes a transcription factor that represses GATA-regulated genes and binds to a dynein light chain protein. Binding of the encoded protein to the dynein light chain protein affects binding to GATA consensus sequences and suppresses its transcriptional activity. Defects in this gene are a cause of tricho-rhino-phalangeal syndrome (TRPS) types I-III. [provided by RefSeq].
HIF1AC45 F230hypoxia inducible factor 1, alpha subunit6.6511.090.007998300.011318
RLFC1 F5rearranged L-myc fusion sequence6.0310.670.004373400.0072889
CLOCKC48 F254circadian locomoter output cycles kaput5.409.640.00209840.00209840.0020984
ARID3BC59 F297AT rich interactive domain 3B (BRIGHT-like)5.669.280.002058600.0021746
TCFECC47 F247transcription factor EC3.869.920.0008260500.015488
NAB1C45 F222Ngfi-A binding protein 15.4010.110.0003695200.083142
CEBPGC49 F257CCAAT/enhancer binding protein (C/EBP), gamma6.289.550.0003506100.039444
FLI1C25 F143Friend leukemia integration 15.0911.060.0001559400.0002599
Model's repressors:
SymbolAssignmentTitlemin expressionmax expressionmean weightmin weightmax weightNCBI human gene summary
ZFP219C Fzinc finger protein 2196.419.16-0.020819-0.020819-0.020819
GATA3C18 F93GATA binding protein 34.9912.30-0.016666-0.016666-0.016666Summary: This gene encodes a protein which belongs to the GATA family of transcription factors. The protein contains two GATA-type zinc fingers and is an important regulator of T-cell development and plays an important role in endothelial cell biology. Defects in this gene are the cause of hypoparathyroidism with sensorineural deafness and renal dysplasia. [provided by RefSeq].
BCL11BC18 F90B-cell leukemia/lymphoma 11B5.7211.15-0.0060495-0.0060495-0.0060495
RFX7C1 F10regulatory factor X, 75.369.69-0.0042163-0.189730